Open Source Libs
Find Open Source Packages
Open Source Libraries
👉
Biodiversity
38 Open Source Biodiversity Software Projects
Free and open source biodiversity code projects including engines, APIs, generators, and tools.
Taxize
223 ⭐
A taxonomic toolbelt for R
Rgbif
118 ⭐
Interface to the Global Biodiversity Information Facility API
Globalbioticinteractions
79 ⭐
Global Biotic Interactions provides access to existing species interaction datasets
Prioritizr
75 ⭐
Systematic conservation prioritization in R
Catalogueoflife General
37 ⭐
The Catalogue of Life
Mapr
35 ⭐
Map species occurrence data
Taxonworks
57 ⭐
Workbench for biodiversity informatics.
Pygbif
38 ⭐
GBIF Python client
Python Dwca Reader
36 ⭐
🐍 A Python package to read Darwin Core Archive (DwC-A) files.
Scrubr
32 ⭐
Clean species occurrence records
Rbien
32 ⭐
Tools for accessing the Botanical Information and Ecology Network (BIEN) database
Rredlist
31 ⭐
IUCN Red List API Client
Ropensci Finch
19 ⭐
Read Darwin Core Archive files
Wdpar
27 ⭐
Interface to the World Database on Protected Areas
Hillr
23 ⭐
An R pakage to calculate diversity through Hill Numbers
Checklister
18 ⭐
Checklist generator
Mobr
16 ⭐
Tools for analyzing changes in diversity across scales
Diversity.jl
25 ⭐
Julia package for diversity measurement
Citynet
19 ⭐
A neural network classifier for urban soundscapes
Mobsim
13 ⭐
Spatial analysis and simulation of ecological communities
Rbison
10 ⭐
Wrapper to the USGS Bison API :warning: ABANDONED
Biodiversityobservationsminer
11 ⭐
A web application to unlock primary biodiversity data from published literature
Trefle API
387 ⭐
🍀 Trefle is a botanical JSON REST API for plants species, allowing you to search and query over all the registered species, and build the next gardening apps and farming robots.
Continuous Reforestation
156 ⭐
Make continuous reforestation part of your daily workflow :deciduous_tree:
Oztree
46 ⭐
OneZoom Tree of Life Explorer
Belugasounds
22 ⭐
Using machine learning to detect beluga whale calls in hydrophone recordings
Awesome Forests
30 ⭐
🌳 A curated list of ground-truth forest datasets for the machine learning and forestry community.
Rafagas
17 ⭐
Daily geospatial links curated by Raf Roset
Gnparser
21 ⭐
Ecosistem.jl
16 ⭐
Julia package for ecosystem simulation
Biodivmapr
16 ⭐
biodivMapR: an R package for α- and β-diversity mapping using remotely-sensed images
Gbif Dl
18 ⭐
GBIF classification dataloaders
Habitatmapping
14 ⭐
Code and data repository for creating a habitat type map
R Package
13 ⭐
Repository of the R-packageGen3sis
Geograph
12 ⭐
GeoGraph provides a tool for analysing habitat fragmentation and related problems in landscape ecology. GeoGraph builds a geospatially referenced graph from land cover or field survey data and enables graph-based landscape ecology analysis as well as interactive visualizations.
Ipybd
10 ⭐
Powerful Data Cleaner For Biodiversity
Biohubbc
10 ⭐
The source of BC’s species inventory data
Taxontabletools
10 ⭐
TaxonTableTools - A comprehensive, platform-independent graphical user interface software to explore and visualise DNA metabarcoding data