32 Open Source Bioinformatics Analysis Software Projects
Free and open source bioinformatics analysis code projects including engines, APIs, generators, and tools.
Webservice Clients34 ⭐
A collection of Web Service Clients to consume EBI's tools via REST and SOAP APIs.
An R package for studying mutational signatures and structural variant signatures along clonal evolution in cancer.
is an open-source LIMS (laboratory Information Management System) for Next Generation Sequencing sample management, statistics and reports, and bioinformatics analysis service management.
High-throughput gene to knowledge mapping through massive integration of public sequencing data.
[DEPRECATED, see https://immunarch.com/] tcR: an R package for immune receptor repertoire advanced data analysis.
NASQAR: A web-based platform for High-throughput sequencing data analysis and visualization
Plant Disease Identification Using Cnn46 ⭐
Plant Disease Identification Using Convulutional Neural Network
PyRice is an API to access some Rice public databases at the same time with consistent output. PyRice design is modular and implements a smart query system which fits the computing resources to optimize the query speed.
pMoSS (p-value Model using the Sample Size) is a Python code to model the p-value as an n-dependent function using Monte Carlo cross-validation. Exploits the dependence on the sample size to characterize the differences among groups of large datasets
programs and scripts, mainly python, for analyses related to nucleic or protein sequences
Team Rosalind Project22 ⭐
This is the main repository for the HackBio'2020 Virtual Internship Experience ❤️
Grupo Estudo Bioinformatica23 ⭐
Repositório do grupo de estudo de Bioinformática da rede de comunidades das PyLadies Brasil.
A comprehensive R package to construct interactive and reproducible biological data analysis applications based on the R platform
Positive Selection13 ⭐
Scripts and procedures for detecting positively selected genes and codons in primates