Open Source Libs
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Open Source Libraries
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Biostatistics
19 Open Source Biostatistics Software Projects
Free and open source biostatistics code projects including engines, APIs, generators, and tools.
Dmrichr
16 ⭐
A R package and executable for the preprocessing, statistical analysis, and downstream testing and visualization of differentially methylated regions (DMRs) from CpG count matrices (Bismark cytosine reports)
Missingdata
12 ⭐
missing data handing: visualize and impute
Trendinessoftrends
13 ⭐
The Trendiness of Trends
Tlverse Handbook
34 ⭐
🎯 :closed_book: Targeted Learning in R: A Causal Data Science Handbook
Pygna
20 ⭐
A Python package for gene network analysis
Confounds
26 ⭐
Conquering confounds and covariates in machine learning
Pmoss
10 ⭐
pMoSS (p-value Model using the Sample Size) is a Python code to model the p-value as an n-dependent function using Monte Carlo cross-validation. Exploits the dependence on the sample size to characterize the differences among groups of large datasets
Mediana
16 ⭐
Clinical Trial Simulations
Verifybamid
53 ⭐
VerifyBamID2: A robust tool for DNA contamination estimation from sequence reads using ancestry-agnostic method.
Biofsharp
89 ⭐
Open source bioinformatics and computational biology toolbox written in F#.
Sashelp
23 ⭐
SAS code snippets
Joinerml
20 ⭐
R package for fitting joint models to time-to-event data and multivariate longitudinal data
Omicspls
15 ⭐
R package for High dimensional data analysis and integration with O2PLS!
Graemeleehickey Joiner
13 ⭐
R package for fitting joint models to time-to-event and longitudinal data
Hruffieux Locus
10 ⭐
locus R package - Large-scale variational inference for variable selection in sparse multiple-response regression
Vubiostat Ps
11 ⭐
Power and Sample Size Calculation
Rsimsum
17 ⭐
Analysis of simulation studies including Monte Carlo error
Handbook_of_biostatistic_r
39 ⭐
:green_book:handbook of biostatistic and R
Gsdesign
26 ⭐
Group sequential design for clinical trials