48 Open Source Computational Neuroscience Software Projects
Free and open source computational neuroscience code projects including engines, APIs, generators, and tools.
Csinva.github.io 397 ⭐
Slides, paper notes, class notes, blog posts, and research on ML 📉, statistics 📊, and AI 🤖.
Open Computational Neuroscience Resources 301 ⭐
A publicly-editable collection of open computational neuroscience resources
Awesome Computational Neuroscience 356 ⭐
A list of schools and researchers in computational neuroscience
Genn 171 ⭐
GeNN is a GPU-enhanced Neuronal Network simulation environment based on code generation for Nvidia CUDA.
Computational Neuroscience Uw 96 ⭐
Python scripts that supplement the Coursera Computational Neuroscience course by the University of Washington
Open Science Resources 68 ⭐
A publicly-editable collection of open science resources, including tools, datasets, meta-resources, etc.
Python In Neuroscience Tutorials 46 ⭐
Collection of tutorials about methods of computational neuroscience using Python
Hnn 55 ⭐
The Human Neocortical Neurosolver (HNN) is a software tool that gives researchers/clinicians the ability to develop/test hypotheses on circuit mechanisms underlying EEG/MEG data.
Neuromatch Academy 32 ⭐
Preparatory Materials, Self-guided Learning, and Project Management for Neuromatch Academy activities
Computational Neuroscience 34 ⭐
Short undergraduate course taught at University of Pennsylvania on computational and theoretical neuroscience. Provides an introduction to programming in MATLAB, single-neuron models, ion channel models, basic neural networks, and neural decoding.
Spikeflow 29 ⭐
Python library for easy creation and running of spiking neural networks in tensorflow.
Interactive_neuron_model_simulator 39 ⭐
Interactive Matplotlib Plots in Python, convering Models such as the Leaky Integrate and Fire, Izhikevich Model, FitzHugh-Nagumo Model etc...
Leabra 38 ⭐
Go implementation of Leabra algorithm for biologically-based models of cognition, based on emergent framework (with Python interface)
Workshop Nyu 2019 14 ⭐
Introductory workshop to modeling and model fitting in cognitive and computational neuroscience
Coursera Computational Neuroscience 38 ⭐
Coursera Computational-NeuroScience course of the University of Washington
Souvik1982 Brain 10 ⭐
Simulating a primordial brain. A biological (spiking) neural network structuring itself through natural selection.
Workshop Bristol 2019 11 ⭐
Introductory workshop to modeling and model fitting in psychophysics and neuroscience
Neuronsimulator Pythontutorial 11 ⭐
This is now in the docs folder of the main NEURON repository. Make all changes there.
Syncopy 18 ⭐
Systems Neuroscience Computing in Python: user-friendly analysis of large-scale electrophysiology data
Neural Nlp 20 ⭐
[PNAS2021] The neural architecture of language: Integrative modeling converges on predictive processing
Dynamics In Neuro Reading List 17 ⭐
This reading list is centered around the practical application of linear dynamical systems models to predict neural data
Stimulus_neural_populations 10 ⭐
A framework for simulating mean-field neural mass models of spiking neurons, comparing them to large network simulations, and predicting electrical stimulation responses of neural populations.